Data of whole genome sequencing of five garden asparagus (Asparagus officinalis) individuals with the MinION nanopore sequencer
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چکیده
منابع مشابه
MinION nanopore sequencing of an influenza genome
Influenza epidemics and pandemics have significant impacts on economies, morbidity and mortality worldwide. The ability to rapidly and accurately sequence influenza viruses is instrumental in the prevention and mitigation of influenza. All eight influenza genes from an influenza A virus were amplified by PCR simultaneously and then subjected to sequencing on a MinION nanopore sequencer. A compl...
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Garden asparagus (Asparagus officinalis L.) is a perennial plant which belongs to the Asparagaceae family native to Asia, North Africa and Europe. This variety is an economically important crop with a high value in terms of food, drug activity and industry. Asparagus is rich in functional components such as Flavonoids, Saponin and Glutathione with high antioxidation activity. In comparison to 2...
متن کاملOxford Nanopore MinION Sequencing and Genome Assembly
The revolution of genome sequencing is continuing after the successful second-generation sequencing (SGS) technology. The third-generation sequencing (TGS) technology, led by Pacific Biosciences (PacBio), is progressing rapidly, moving from a technology once only capable of providing data for small genome analysis, or for performing targeted screening, to one that promises high quality de novo ...
متن کاملAnalysis of Transposable Elements in the Genome of Asparagus officinalis from High Coverage Sequence Data
Asparagus officinalis is an economically and nutritionally important vegetable crop that is widely cultivated and is used as a model dioecious species to study plant sex determination and sex chromosome evolution. To improve our understanding of its genome composition, especially with respect to transposable elements (TEs), which make up the majority of the genome, we performed Illumina HiSeq20...
متن کاملEgg attachment of the asparagus beetle Crioceris asparagi to the crystalline waxy surface of Asparagus officinalis.
Plant surfaces covered with crystalline epicuticular waxes are known to be anti-adhesive, hardly wettable and preventing insect attachment. But there are insects that are capable of gluing their eggs to these surfaces by means of proteinaceous secretions. In this study, we analysed the bonding region between the eggs of Crioceris asparagi and the plant surface of Asparagus officinalis using lig...
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ژورنال
عنوان ژورنال: Data in Brief
سال: 2020
ISSN: 2352-3409
DOI: 10.1016/j.dib.2019.104838